CDS

Accession Number TCMCG007C34212
gbkey CDS
Protein Id XP_018514824.1
Location complement(join(25830109..25830183,25830291..25830396,25830488..25830960,25831050..25831139,25831240..25831380,25831682..25831873,25832017..25832247,25832438..25832518,25832595..25833203))
Gene LOC103870585
GeneID 103870585
Organism Brassica rapa

Protein

Length 665aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_018659308.2
Definition protein SIEL isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category S
Description snRNA processing
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13141        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003002        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009956        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010496        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016073        [VIEW IN EMBL-EBI]
GO:0016180        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034472        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043628        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090057        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGAAGACGACTCCGTTTCACTCACTCTCCACACTCTAGCCTCCATTAGATCACTCATCATCAACGCCGACACTCCCTTCTCCGTAATCTCCTCGGTCCTCGACCTCCTCACTGGTCTTCTCCCCCGAGACGACTCGCCGATCCTCCACCACGTCCTCAAGCTCCTCTCCGATCTCTCCCTCTCGAGAAACGACTTAGCACCACAGATCTTCGAATCAATCCTCTCCAACTTGCTCCGCCTCCAAACCTCCGCCGCGGAATCGCTCGCCGTGCTCGCGTCGTTATCCGAACGAAACCCTACCGCCGCCGCAATCGACGGAGAGGCGTTCGCGACGATTTGCATCGGAGCAGATGTGTCTTCTCGGATGTGGATGCTTAGGAACGCGGAGAGGTTCGATCTCCCGTCGTCGGTGCTCTTCACGTTGTTCTTCGGGTTCACGAAGGATCCGTATCCGTGTATCAGAAGAGTAGCTCTCGATGGATTGGTTTATGTATGTGAGGCTGGTGGTTTTGATCACGCACGTGCCGTGCAAGGTTGTTATGCACGTGCTGTTGAGCTTCTGGACGATGATGAAGATAGCGTCAGATCTTCTGCAGTTCGTGCCGTTAGTGTGTGGGGCAAAGTGTTGATAGCATCCAAGGAAGATGCAAATAGAAGAGAGTGCTCTGATGCTGTGTTTCTCCAGCTTTGTTCTGTTGTGAGAGATATGAGTGTAGACGTGAGGGTTGAGGTGTTCAAGGCGTTTGGGGTGATAGGAACTGCATCAGAAAGCATTATACTGCAAACACTTTCTAAAAAAGTATTGAGAGCCGCCGGGAAAGGGAAGAAACCGCAGAATCGTTTTTCGAATGAGTCTGCTGATGCCGCTGCTGCAGCTGGAGTTTTCATCCATGGTTTCGAAGATGAATTCTACGAGGTACGGGAAGCTGCGGTTGAGTCTTTCCACTCCCTCTCAGTAAATTCTATCGAATTCCCAGATGAAGCTGTTTGCCTATTGATGGATATGCTATACGATGATTATATGGTTGTCAGGTTAAAAGCTTTAGAGGCATTGCATCATATAGCACACATGGGAAACTTGAAGATACAGGAAACTTATATTCCCGCTTTTTTGGATGCTATTGTTGATACTTCTGAGAACATAAGACTTACGGCTAGAAACATTCTCAAATTGGCAAAGCTGCCCGATATGAAGCTGGTCAACAAAGGTGTTGATGGTGTCCTAAAAAGTTTAGAGATGTATCCACAGGACGAACCTGATATCTTGTCTACTCTGTTCCTTCTCGGACAAAACCATTCAAATTTCGTAGTCAATATAATTAAGAGATTTCGTGCAAAGTTGGAGACAGACTCCGGAAATAAAAGTGAATTCAACAGCCGACAGGTGTCTGCGTTTCTGATGTTCATAATCTCAGCTCCTCTCTCAAACAAACAAAGCATCACTTCCATACCGCCTTTGGCTTTTTCATATTCGCTTGCAATGCTGGGAAAATTCTCTTGTGGACTTCATGATATGATGGACCAGGATACTCTTTTGGCGTACTTGGCTCATTGCACTACTCGTTCTGCTTCTTCGGGTACAGAATTCAATAAAGCAGATACGTTTTTAAATGCATATAGGCGCAGTAATGCAGATCATAGCGGAGACCCCGTCCTACTACCAAGCAATATACCTGCTGAGAGCAAACCAATGGCTTCCAAAGAAGAATTGGATCCAGCACTTAAGCTTGTGAGCCATATACAGTTGAAAGTGAAGGCTGCCTGGTTATTATTACAATCAGCATTCTCTAAAGAAGCAATCCGAGCCTTAAGGGCTTGCAAACAGGAGTTATCAACTTTGACAACCAATTCCTCAATCTCCAATGGTGCATTAGGATTTATGTGTCAGTACGTTCACCTAATCGAACTTCTCGCTCAGATTCACAGGCCTGTCTACGGAGGTGTCACTTGTGATGGAGCTAGTAATTTTAGGTTGCTTGTTAAGGCTATATAA
Protein:  
MEEDDSVSLTLHTLASIRSLIINADTPFSVISSVLDLLTGLLPRDDSPILHHVLKLLSDLSLSRNDLAPQIFESILSNLLRLQTSAAESLAVLASLSERNPTAAAIDGEAFATICIGADVSSRMWMLRNAERFDLPSSVLFTLFFGFTKDPYPCIRRVALDGLVYVCEAGGFDHARAVQGCYARAVELLDDDEDSVRSSAVRAVSVWGKVLIASKEDANRRECSDAVFLQLCSVVRDMSVDVRVEVFKAFGVIGTASESIILQTLSKKVLRAAGKGKKPQNRFSNESADAAAAAGVFIHGFEDEFYEVREAAVESFHSLSVNSIEFPDEAVCLLMDMLYDDYMVVRLKALEALHHIAHMGNLKIQETYIPAFLDAIVDTSENIRLTARNILKLAKLPDMKLVNKGVDGVLKSLEMYPQDEPDILSTLFLLGQNHSNFVVNIIKRFRAKLETDSGNKSEFNSRQVSAFLMFIISAPLSNKQSITSIPPLAFSYSLAMLGKFSCGLHDMMDQDTLLAYLAHCTTRSASSGTEFNKADTFLNAYRRSNADHSGDPVLLPSNIPAESKPMASKEELDPALKLVSHIQLKVKAAWLLLQSAFSKEAIRALRACKQELSTLTTNSSISNGALGFMCQYVHLIELLAQIHRPVYGGVTCDGASNFRLLVKAI